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Index and biological spectrum of human DNase I hypersensitive sites
Wouter Meuleman, Alexander Muratov, Eric Rynes, Jessica Halow, Kristen Lee, Daniel Bates, Morgan Diegel, Douglas Dunn, Fidencio Neri, Athanasios Teodosiadis, Alex, Reynolds, Eric Haugen, Jemma Nelson, Audra Johnson, Mark Frerker, Michael Buckley, Richard Sandstrom, Jeff Vierstra, Rajinder Kaul, John Stamatoyannopoulos
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Global reference mapping of human transcription factor footprints
Jeff Vierstra, John Lazar, Richard Sandstrom, Jessica Halow, Kristen Lee, Daniel Bates, Morgan Diegel, Douglas Dunn, Fidencio Neri, Eric Haugen, Eric Rynes, Alex, Reynolds, Jemma Nelson, Audra Johnson, Mark Frerker, Michael Buckley, Rajinder Kaul, Wouter Meuleman, John Stamatoyannopoulos
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Integrative analysis of 10,000 epigenomic maps across 800 samples for regulatory genomics and disease dissection
To help elucidate genetic variants underlying complex traits, we develop EpiMap, a compendium of 833 reference epigenomes across 18 …
Carles B. Adsera, Yongjin P. Park, Wouter Meuleman, Manolis Kellis
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Multi-scale chromatin state annotation using a hierarchical hidden Markov model
Eugenio Marco, Wouter Meuleman, Jialiang Huang, Kimberly Glass, Luca Pinello, Jianrong Wang, Manolis Kellis, Guo-Cheng Yuan
Small chromosomal regions position themselves autonomously according to their chromatin class
Harmen JG Van De Werken, Josien C Haan, Yana Feodorova, Dominika Bijos, An Weuts, Koen Theunis, Sjoerd JB Holwerda, Wouter Meuleman, Ludo Pagie, Katharina Thanisch, others
FTO obesity variant circuitry and adipocyte browning in humans
Melina Claussnitzer, Simon N Dankel, Kyoung-Han Kim, Gerald Quon, Wouter Meuleman, Christine Haugen, Viktoria Glunk, Isabel S Sousa, Jacqueline L Beaudry, Vijitha Puviindran, others
DOI
Integrative analysis of 111 reference human epigenomes
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller, others
DOI
Nuclear p120-catenin regulates the anoikis resistance of mouse lobular breast cancer cells through Kaiso-dependent Wnt11 expression
Robert AH Van de Ven, Milou Tenhagen, Wouter Meuleman, Jeske JG van Riel, Ron CJ Schackmann, Patrick WB Derksen
Chromatin position effects assayed by thousands of reporters integrated in parallel
Waseem Akhtar, Johann de Jong, Alexey V Pindyurin, Ludo Pagie, Wouter Meuleman, Jeroen de Ridder, Anton Berns, Lodewyk FA Wessels, Maarten van Lohuizen, Bas van Steensel
Constitutive nuclear lamina--genome interactions are highly conserved and associated with A/T-rich sequence
Wouter Meuleman, Daan Peric-Hupkes, Jop Kind, Jean-Bernard Beaudry, Ludo Pagie, Manolis Kellis, Marcel Reinders, Lodewyk Wessels, Bas van Steensel
DOI